BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019B04LP1|AL427430
(917 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1578 1543 0.0
>3x_Contig1578
Length = 13178
Score = 1543 bits (774), Expect = 0.0
Identities = 878/916 (95%), Gaps = 1/916 (0%)
Strand = Plus / Plus
Query: 1 tgtacgggtgtagta-tttacccttacaccctgtgtattctcagaattatttgtattttt 59
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6865 tgtacgggtgtagtaatttacccttacaccctgtgtattctcagaattatttgtattttt 6924
Query: 60 agaatatttcccttttcggattttcacatcccaactttttctctttttcttacagtttaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6925 agaatatttcccttttcggattttcacatcccaactttttctctttttcttacagtttaa 6984
Query: 120 caaaaaatctactatcctcttttcggtctacgcttgttttagtggacagtggatctttca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6985 caaaaaatctactatcctcttttcggtctacgcttgttttagtggacagtggatctttca 7044
Query: 180 tcctcacagttttttcaattctgcaaacttgacgagtttcaaactcatttacaataccaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7045 tcctcacagttttttcaattctgcaaacttgacgagtttcaaactcatttacaataccaa 7104
Query: 240 ccagttttcatctttagcaagtgattagaatttaaagattgtataggttgttaactacgt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7105 ccagttttcatctttagcaagtgattagaatttaaagattgtataggttgttaactacgt 7164
Query: 300 tttatagttgttcatattcactcttatataccctccagaaaccaagcaaacacaaagaaa 359
|||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||
Sbjct: 7165 tttatagttgttcatattcactcttatataccctccagaaaccaagtaaaaaaaaagaaa 7224
Query: 360 ccaaaatgtatgakacctaatgcacaccgcgcacagttatggggccgaagaactcagtga 419
|||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 7225 tcaaaatgtatgatacctaatgcacaaggcgcacagttatggggccgaagaaatcagtga 7284
Query: 420 tcgatataacaagttgaactatgaactatgatagactagacgatgaggattgaagaagac 479
|||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 7285 tcgatataacaagttgaattatgaagtatgatagactagacgatgaggattgaagaagac 7344
Query: 480 gaagaagaagcagactgatacgatacaggcagactgacctgttcactaggagatggaatc 539
|||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 7345 gaagaagaagcagagtgatacgatacaggcagaatgacctgttcactaggagatggaatc 7404
Query: 540 aacatagaagaagtgtagtgacaaatgggtaactggratkataccataagcacaagarac 599
|| |||||||||||||||||| |||||||||||||| || ||| |||||||||||| ||
Sbjct: 7405 aatatagaagaagtgtagtgagaaatgggtaactggaattataagataagcacaagaaac 7464
Query: 600 tacagckagatgcaaaaktccagtgtgatgatttatagtgtcagckccacacgcacgaca 659
|||||| |||||||||| ||||||||||||||||||||||||||| | | | ||| ||||
Sbjct: 7465 tacagctagatgcaaaattccagtgtgatgatttatagtgtcagctcgaaaggcaggaca 7524
Query: 660 gcagaataaatgacgatctattagacctcctcccccaaaaaaactgttgttcctttaatt 719
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7525 gcagaataaatgaggatctattagacctcctcccccaaaaaaactgttgttcctttaatt 7584
Query: 720 gcaacaattttactaacttttatatctgtgttattacccattctacctgtggtatcgatt 779
|||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||
Sbjct: 7585 gcaacaattttactaacttttatatctgtgttattagcgattctacgtgtggtatcgatt 7644
Query: 780 cattaccacccattatgtgaacaaattgaatcgaactattggaatcggacgtaatgaata 839
|||||||||||||||||||| ||||||||| ||| ||||||||||||| ||||||||||
Sbjct: 7645 aattaccacccattatgtgaataaattgaatggaaatattggaatcggaagtaatgaata 7704
Query: 840 cacaattcattttatattcagggctaaaagaactaagaaggttggtatcactggtaagta 899
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7705 aaaaattcattttatattcagggctaaaagaactaagaaggttggtatcactggtaagta 7764
Query: 900 cggtgtccgttacggt 915
||||||||||||||||
Sbjct: 7765 cggtgtccgttacggt 7780
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7449
Number of Sequences: 1807
Number of extensions: 7449
Number of successful extensions: 64
Number of sequences better than 1.0e-20: 1
length of query: 917
length of database: 10,358,551
effective HSP length: 16
effective length of query: 901
effective length of database: 10,329,639
effective search space: 9307004739
effective search space used: 9307004739
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)